Fitness data for PS417_05570 in Pseudomonas simiae WCS417

DeoR faimly transcriptional regulator
SEED: Glycerol-3-phosphate regulon repressor, DeoR family
KEGG: DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.5)


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group condition fitness t score  
carbon source L-Valine (C) -3.7 -4.5 compare
carbon source L-Valine (C) -3.6 -4.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.7 -4.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.3 -4.0 compare
carbon source Gly-Glu (C) -2.1 -7.1 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -1.8 -4.7 compare
carbon source D-Alanine (C) -1.8 -5.4 compare
carbon source D-Lactate (C) -1.7 -4.0 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -1.7 -6.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7 -4.0 compare
soil soil sample 2; outgrowth in LB -1.6 -4.1 compare
carbon source D-Alanine (C) -1.6 -7.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.6 -3.2 compare
carbon source octanoate (C) -1.6 -3.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.6 -2.2 compare
carbon source L-Alanine (C) -1.5 -6.2 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +1.6 +7.9 compare
carbon source L-Histidine (C) +1.9 +12.3 compare
carbon source L-Glutamine (C) +2.6 +16.6 compare
carbon source L-Glutamine (C) +2.7 +10.3 compare