Fitness data for PS417_05405 in Pseudomonas simiae WCS417

L-alanine and D-alanine permease (from data)
Original annotation: D-alanine/D-serine/glycine permease
SEED: D-serine/D-alanine/glycine transporter
KEGG: amino acid transporter, AAT family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source L-Alanine (C) -3.3 -12.9 compare
carbon source L-Alanine (C) -2.8 -13.2 compare
carbon source D-Alanine (C) -1.8 -8.5 compare
carbon source D-Alanine (C) -1.7 -9.4 compare
root root sample 6; outgrowth in LB -0.6 -2.2 compare
carbon source L-Valine (C) -0.6 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.4 compare
carbon source RCH2_defined_glucose with MS_media 1x +0.5 +2.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +1.9 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.5 +2.6 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +0.5 +2.0 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x +0.5 +3.2 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x +0.5 +2.6 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x +0.5 +2.9 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x +0.5 +2.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.6 +1.0 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.6 +3.5 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.7 +3.7 compare