Fitness data for PS417_05235 in Pseudomonas simiae WCS417

peptidase inhibitor I42
SEED: Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)
KEGG: inhibitor of cysteine peptidase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.003 mg/ml -2.0 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.6 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.5 -2.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.5 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.4 -1.3 compare
motility inner cut, LB soft agar motility assay -1.2 -2.0 compare
seeds Growth on radish seeds for 72 hours -1.2 -1.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.2 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2 -1.2 compare
seeds Growth on radish seeds for 72 hours -1.1 -1.0 compare
carbon source L-Valine (C) -1.0 -1.0 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +1.1 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.1 +1.7 compare
phage JP1 MOI 1 +1.1 +2.2 compare
root root sample 6; outgrowth in LB +1.2 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +1.2 +2.4 compare
soil soil sample 4; outgrowth in LB +1.2 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.2 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +1.3 +2.0 compare
stress Gentamicin 0.008 mg/ml +1.4 +1.3 compare