Fitness data for PS417_05230 in Pseudomonas simiae WCS417

membrane protein
SEED: POSSIBLE MEMBRANE PROTEIN

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
stress L-Lysine 60 mM -0.7 -2.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -2.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.5 -2.2 compare
soil soil sample 3; outgrowth in LB -0.5 -2.3 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.5 -1.3 compare
phage JP1 MOI 1 -0.5 -2.4 compare
soil soil sample 6; outgrowth in LB -0.4 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.4 -1.8 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.4 +2.9 compare
carbon source Carbon source L-Ornithine 10 mM +0.5 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +1.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +2.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.7 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.5 +1.5 compare