Fitness data for PS417_05225 in Pseudomonas simiae WCS417

tRNA methyltransferase
SEED: tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase
KEGG: tRNA (cmo5U34)-methyltransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
rhizosphere rhizosphere sample 1; outgrowth in LB -1.0 -3.5 compare
root root sample 6; outgrowth in LB -0.8 -2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.6 compare
nophagecontrol Only library -0.7 -4.1 compare
solid stress Fraxetin 2 mM; solid stress -0.7 -3.6 compare
phage Wcs_1 -0.7 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.6 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -2.0 compare
phage JP1 MOI 10 -0.6 -2.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -1.7 compare
carbon source Carbon source D-Mannitol 10 mM -0.5 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.6 compare
stress Polymyxin B sulfate 0.006 mg/ml -0.5 -1.9 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.5 -2.4 compare
carbon source D,L-Lactate (C) +0.5 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.3 compare