Fitness data for PS417_05160 in Pseudomonas simiae WCS417

DNA polymerase III subunit chi
SEED: DNA polymerase III chi subunit (EC 2.7.7.7)
KEGG: DNA polymerase III subunit chi

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.5)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.6 -0.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -3.2 -0.8 compare
soil soil sample 7; outgrowth in LB -3.2 -1.0 compare
soil soil sample 5; outgrowth in LB -2.9 -1.0 compare
motility outer cut, LB soft agar motility assay -2.8 -1.5 compare
phage JP1 MOI 0.1 -2.6 -1.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.5 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -2.4 -0.8 compare
phage P. simiae OR Antrim MOI 10 -2.4 -1.2 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.9 -0.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.8 -1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.8 -0.9 compare
solid stress Fraxetin 2 mM; solid stress -1.8 -1.3 compare
carbon source D-Glucose (C) -1.7 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -1.6 -1.1 compare
solid stress 80% Methanol 1 mM; solid stress -1.6 -1.7 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -1.6 -1.5 compare
phage P. simiae ORA MOI 1 -1.5 -1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.9 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +2.4 +2.8 compare