Fitness data for PS417_05145 in Pseudomonas simiae WCS417

23S rRNA methyltransferase
SEED: Ribosomal RNA large subunit methyltransferase F (EC 2.1.1.51)
KEGG: ribosomal RNA large subunit methyltransferase F

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -1.8 compare
phage P. simiae OR Antrim MOI 0.1 -0.4 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -1.7 compare
carbon source Carbon source D-Mannitol 10 mM -0.4 -2.2 compare
carbon source L-Tryptophan (C) -0.4 -2.2 compare
stress Dimethyl Sulfoxide 5 vol% -0.4 -2.8 compare
soil soil sample 6; outgrowth in LB -0.4 -1.5 compare
liquid stress Fraxetin 3 mM; liquid stress -0.4 -2.1 compare
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.3 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.0 compare
carbon source Trisodium citrate (C) +0.3 +1.0 compare
solid stress Fraxetin 3 mM; solid stress +0.4 +1.7 compare
stress Neomycin 0.04 mg/ml +0.4 +2.6 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +1.4 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x +0.4 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +1.9 compare
carbon source Trisodium citrate (C) +0.5 +1.1 compare