Fitness data for Atu5162 in Agrobacterium fabrum C58

type IV secretion protein AvhB1
KEGG: type IV secretion system protein VirB1

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source L-Phenylalanine (N) -0.9 -3.1 compare
carbon source Cellohexaose (C) -0.6 -2.5 compare
nitrogen source Nicotinamide (N) -0.6 -2.1 compare
nitrogen source L-Ornithine (N) -0.6 -2.6 compare
phage Phage 100.3 + bacteria +0.5 +2.8 compare
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +1.5 compare
lb_sorghum f72 f505 LB_Sorghum F72 F505 +0.5 +3.5 compare
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +1.1 compare
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +2.2 compare
phage Phage 95.1 + bacteria +0.5 +3.0 compare
lb_sorghum btx 430 LB_Sorghum Btx 430 +0.6 +3.3 compare
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 +1.9 compare
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 +1.4 compare
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 +4.3 compare
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 +2.2 compare
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 +2.1 compare
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 +2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +2.0 compare
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.1 +2.9 compare
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.3 +2.6 compare