Fitness data for Atu5051 in Agrobacterium fabrum C58

ATP-dependent DNA ligase
SEED: ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


Add gene:

Or see all 1003 experiments or choose conditions

group condition fitness t score  
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -2.2 compare
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -2.1 compare
stress R2A with Chromium(III) Chloride Hexahydrate 0.02 mM -0.3 -2.2 compare
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -1.8 compare
phage AgroPhage_C10 -0.3 -1.6 compare
stress R2A with Cefoxitin 0.008 mM -0.3 -2.0 compare
stress R2A with nitrate 375 mM -0.3 -2.0 compare
stress R2A with Tetracycline 0.002 mM -0.3 -1.6 compare
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +1.4 compare
nitrogen source 5-Aminovaleric (N) +0.3 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3 +1.4 compare
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.7 compare
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +2.0 compare
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +1.5 compare
carbon source D-Cellobiose (C) +0.3 +2.0 compare
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +1.8 compare
carbon source D-Saccharic potassium salt (C) +0.3 +1.8 compare
carbon source Myristic (C) +0.3 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.7 compare