Fitness data for Atu4193 in Agrobacterium fabrum C58

oligopeptide ABC transporter permease
SEED: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
KEGG: peptide/nickel transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Galacturonic Acid (C) -1.6 -8.2 compare
carbon source D-Galacturonic Acid (C) -1.6 -7.1 compare
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 -3.2 compare
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 -2.9 compare
stress Chloramphenicol 12.5 ug/mL -0.6 -1.6 compare
phage AgroPhage_E10 -0.5 -1.5 compare
no phage P4L4 -0.5 -2.3 compare
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -1.2 compare
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -0.5 -2.3 compare
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -1.9 compare
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -1.4 compare
nophagecontrol No phage control +0.4 +1.6 compare
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +2.3 compare
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +2.3 compare
carbon source D-Saccharic potassium salt (C) +0.5 +1.9 compare
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.5 +2.6 compare
carbon source D-Saccharic potassium salt (C) +0.5 +2.3 compare
phage AgroPhage_F10 +0.5 +1.1 compare
phage AgroPhage_F04 +0.6 +1.9 compare