Fitness data for Atu1413 in Agrobacterium fabrum C58

ABC transporter, substrate binding protein (branched chain amino acid)
SEED: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
KEGG: branched-chain amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress Chloramphenicol 12.5 ug/mL -0.4 -1.8 compare
phage AgroPhage_E04 -0.3 -1.3 compare
phage Phage 95.3 + bacteria -0.3 -2.5 compare
nophagecontrol No phage control -0.3 -1.5 compare
in planta Bethi_Library_OD0.05 +0.3 +2.1 compare
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +1.3 compare
in planta Bethi_Library_OD0.1 +0.3 +2.2 compare
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.3 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.2 compare
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +1.7 compare
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +2.3 compare
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.8 compare
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +3.8 compare
in planta Bethi_Library_OD0.01 +0.5 +2.9 compare
phage AgroPhage_H10 +0.5 +2.7 compare
no phage P2L5 +0.5 +1.6 compare
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +2.1 compare
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +3.5 compare