Fitness data for Atu0221 in Agrobacterium fabrum C58

component of type IV pilus
SEED: Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly
KEGG: pilus assembly protein CpaC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Xylose (C) -0.5 -3.7 compare
carbon source Cellopentaose (C) -0.4 -3.6 compare
carbon source Stachyose (C) -0.4 -2.8 compare
stress Erythromycin 12.5 ug/mL -0.3 -2.5 compare
stress R2A with Nalidixic 0.02 mM -0.3 -2.5 compare
carbon source Cellohexaose (C) -0.3 -2.8 compare
phage AgroPhage_C04 -0.3 -1.5 compare
stress R2A with Bacitracin 0.6 mM -0.3 -2.1 compare
stress Erythromycin 12.5 ug/mL -0.3 -2.3 compare
carbon source D-Quinic (C) -0.3 -2.3 compare
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -1.6 compare
carbon source methyl-beta-D-xylopyranoside (C) -0.3 -2.3 compare
stress R2A with Tetracycline 0.002 mM -0.3 -2.0 compare
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +1.3 compare
carbon source L-Alanine (C) +0.3 +2.5 compare
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.4 +2.8 compare
nitrogen source DL-2-Aminobutyric (N) +0.4 +1.2 compare
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +1.8 compare
stress R2A with Vancomycin 0.009 mM +1.7 +13.8 compare
stress R2A with Vancomycin 0.009 mM +2.0 +13.9 compare