Fitness data for ABID97_RS28395 in Variovorax sp. OAS795

LysR substrate-binding domain-containing protein
KEGG: LysR family transcriptional regulator, glycine cleavage system transcriptional activator

All 111 fitness values, sorted by group and condition


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group condition fitness t score  
carbon source 2-Deoxy-D-Ribose (C) -0.2 -0.4 compare
2-Deoxy-D-Ribose (C) -0.4 -0.8 compare
4-Hydroxybenzoic Acid (C) +0.0 +0.0 compare
4-Hydroxybenzoic Acid (C) +0.1 +0.1 compare
a-Ketoglutaric (C) -0.2 -0.4 compare
a-Ketoglutaric (C) -1.0 -1.4 compare
Adenine (C) +0.3 +0.5 compare
Adenine (C) -0.0 -0.1 compare
casaminos (C) -0.5 -0.8 compare
casaminos (C) +0.2 +0.3 compare
D,L-Malic Acid (C) -1.0 -0.9 compare
D,L-Malic Acid (C) -0.2 -0.3 compare
D-Arabinose (C) -0.5 -0.7 compare
D-Arabinose (C) -0.2 -0.3 compare
D-Fructose (C) -0.3 -0.5 compare
D-Fructose (C) -0.5 -0.9 compare
D-Galactose (C) -1.2 -1.5 compare
D-Galactose (C) -0.9 -1.5 compare
D-Gluconic Acid (C) -0.2 -0.3 compare
D-Gluconic Acid (C) -0.5 -0.9 compare
D-Glucose (C) +0.1 +0.1 compare
D-Glucose (C) +0.4 +0.8 compare
D-Glucuronic Acid (C) +0.3 +0.5 compare
D-Mannose (C) -0.3 -0.5 compare
D-Mannose (C) +0.3 +0.6 compare
D-Ribose (C) -0.1 -0.2 compare
D-Ribose (C) -0.7 -1.1 compare
D-Serine (C) +0.0 +0.1 compare
D-Serine (C) -1.1 -1.4 compare
D-Sorbitol (C) -0.6 -1.0 compare
D-Sorbitol (C) -0.7 -1.1 compare
D-Xylose (C) -0.4 -0.7 compare
D-Xylose (C) -0.2 -0.4 compare
Ethanol (C) -0.4 -0.6 compare
Ethanol (C) -0.5 -0.7 compare
Glucuronamide (C) -1.0 -1.1 compare
Glucuronamide (C) -0.0 -0.1 compare
Gly-Glu (C) -0.3 -0.5 compare
Gly-Glu (C) -0.1 -0.2 compare
Glycerol (C) +0.4 +0.8 compare
Glycerol (C) -0.6 -1.0 compare
Glycolic Acid (C) -0.0 -0.0 compare
Glycolic Acid (C) -1.0 -1.5 compare
L-Alanine (C) -0.9 -1.0 compare
L-Alanine (C) -0.5 -0.6 compare
L-Arabinose (C) -0.4 -0.6 compare
L-Arabinose (C) -0.8 -1.3 compare
L-Asparagine (C) -0.9 -1.3 compare
L-Asparagine (C) -0.0 -0.1 compare
L-Fucose (C) +0.3 +0.5 compare
L-Fucose (C) -1.5 -1.6 compare
L-Glutamic (C) +0.1 +0.2 compare
L-Glutamic (C) -0.5 -0.9 compare
L-Glutamine (C) -0.6 -0.9 compare
L-Glutamine (C) +0.2 +0.4 compare
L-Histidine (C) -0.8 -0.9 compare
L-Histidine (C) -1.1 -1.1 compare
L-Leucine (C) -0.3 -0.5 compare
L-Leucine (C) -0.3 -0.5 compare
L-Malic (C) -0.9 -1.4 compare
L-Malic (C) +0.1 +0.2 compare
L-Phenylalanine (C) +0.1 +0.2 compare
L-Phenylalanine (C) -0.3 -0.5 compare
L-Proline (C) +0.2 +0.5 compare
L-Proline (C) -0.2 -0.4 compare
L-Threonine (C) -0.7 -1.1 compare
L-Threonine (C) -0.2 -0.4 compare
L-Tryptophan (C) -0.5 -0.9 compare
L-Tryptophan (C) -0.0 -0.0 compare
L-tyrosine (C) -0.6 -0.7 compare
L-tyrosine (C) -0.7 -0.6 compare
acetate (C) -0.3 -0.4 compare
acetate (C) -0.6 -0.9 compare
butyrate (C) -1.1 -1.0 compare
butyrate (C) +0.1 +0.1 compare
D,L-Lactate (C) -0.2 -0.4 compare
D,L-Lactate (C) -0.0 -0.0 compare
D-Lactate (C) -0.6 -1.1 compare
Formate (C) +0.6 +1.1 compare
Formate (C) -0.3 -0.6 compare
Fumarate (C) +0.1 +0.3 compare
Fumarate (C) -0.0 -0.0 compare
L-Lactate (C) -0.7 -1.1 compare
L-Lactate (C) -1.0 -1.6 compare
propionate (C) +0.3 +0.4 compare
propionate (C) +0.6 +1.0 compare
pyruvate (C) +0.3 +0.6 compare
pyruvate (C) -0.6 -1.1 compare
succinate (C) -0.3 -0.4 compare
succinate (C) -0.1 -0.1 compare
Tween 20 (C) -0.7 -1.1 compare
Tween 20 (C) -1.2 -1.3 compare
control NP -0.4 -0.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -0.7 compare
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 +1.1 compare
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -0.5 compare
phage V1_1 +0.7 +1.5 compare
V1_1 -0.0 -0.1 compare
V1_10 +0.3 +0.4 compare
V1_10 -0.3 -0.5 compare
V2_1 -0.0 -0.1 compare
V2_1 +0.5 +1.1 compare
V2_10 +0.5 +0.8 compare
V2_10 +0.1 +0.2 compare
V2_100 -0.2 -0.2 compare
plant outgrowth control Plant outgrowth control +0.3 +0.6 compare
Plant outgrowth control +0.5 +0.8 compare
r2a outgrowth control R2A outgrowth control +0.3 +0.8 compare
R2A outgrowth control -0.3 -0.6 compare
R2A outgrowth control +0.5 +0.9 compare
R2A outgrowth control +0.1 +0.1 compare