Fitness data for ABID97_RS09860 in Variovorax sp. OAS795

RNA ligase family protein
SEED: ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -1.5 compare
phage phage_S63 10 MOI -0.4 -2.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -1.4 compare
carbon source L-tyrosine (C) -0.4 -1.7 compare
phage V2_10 -0.3 -1.4 compare
carbon source L-Malic (C) -0.3 -1.4 compare
phage V1_10 -0.3 -1.4 compare
plant outgrowth control Plant outgrowth control -0.3 -0.9 compare
carbon source D-Sorbitol (C) -0.3 -1.1 compare
phage V2_100 -0.2 -0.6 compare
phage V1_1 -0.2 -1.6 compare
carbon source L-Arabinose (C) -0.2 -1.0 compare
phage V1_1 -0.2 -1.1 compare
carbon source butyrate (C) -0.2 -1.2 compare
carbon source L-Threonine (C) -0.2 -1.2 compare
r2a outgrowth control R2A outgrowth control +0.3 +1.1 compare
carbon source D-Mannose (C) +0.3 +1.4 compare
carbon source D-Lactate (C) +0.3 +1.4 compare
carbon source 4-Hydroxybenzoic Acid (C) +0.3 +1.6 compare
carbon source propionate (C) +0.9 +1.3 compare