Fitness data for ABID97_RS08015 in Variovorax sp. OAS795

LysR substrate-binding domain-containing protein
SEED: Glycine cleavage system transcriptional activator

All 111 fitness values, sorted by group and condition


Add gene:

Or see strongest phenotypes or choose conditions

group condition fitness t score  
carbon source 2-Deoxy-D-Ribose (C) +0.2 +0.8 compare
2-Deoxy-D-Ribose (C) +0.5 +2.7 compare
4-Hydroxybenzoic Acid (C) +0.2 +0.6 compare
4-Hydroxybenzoic Acid (C) +0.0 +0.2 compare
a-Ketoglutaric (C) +0.0 +0.1 compare
a-Ketoglutaric (C) +0.6 +3.5 compare
Adenine (C) +0.2 +1.0 compare
Adenine (C) +0.2 +0.9 compare
casaminos (C) -0.1 -0.6 compare
casaminos (C) -0.0 -0.2 compare
D,L-Malic Acid (C) -0.1 -0.3 compare
D,L-Malic Acid (C) -0.2 -0.5 compare
D-Arabinose (C) +0.2 +0.6 compare
D-Arabinose (C) -0.1 -0.3 compare
D-Fructose (C) +0.1 +0.3 compare
D-Fructose (C) +0.2 +1.0 compare
D-Galactose (C) -0.3 -1.2 compare
D-Galactose (C) -0.4 -2.0 compare
D-Gluconic Acid (C) +0.1 +0.5 compare
D-Gluconic Acid (C) +0.0 +0.1 compare
D-Glucose (C) +0.3 +0.9 compare
D-Glucose (C) +0.1 +0.4 compare
D-Glucuronic Acid (C) -0.4 -0.8 compare
D-Mannose (C) -0.1 -0.3 compare
D-Mannose (C) +0.1 +0.4 compare
D-Ribose (C) +0.3 +1.3 compare
D-Ribose (C) -0.1 -0.6 compare
D-Serine (C) +0.1 +0.2 compare
D-Serine (C) +0.2 +1.1 compare
D-Sorbitol (C) +0.1 +0.7 compare
D-Sorbitol (C) -0.8 -2.3 compare
D-Xylose (C) +0.2 +0.8 compare
D-Xylose (C) -0.0 -0.1 compare
Ethanol (C) +0.3 +1.2 compare
Ethanol (C) +0.3 +1.1 compare
Glucuronamide (C) -0.1 -0.4 compare
Glucuronamide (C) +0.1 +0.4 compare
Gly-Glu (C) +0.0 +0.1 compare
Gly-Glu (C) -0.0 -0.1 compare
Glycerol (C) -0.2 -0.8 compare
Glycerol (C) +0.3 +1.6 compare
Glycolic Acid (C) -0.3 -1.0 compare
Glycolic Acid (C) -0.2 -0.7 compare
L-Alanine (C) +0.2 +0.6 compare
L-Alanine (C) -0.1 -0.4 compare
L-Arabinose (C) -0.6 -1.5 compare
L-Arabinose (C) -0.0 -0.1 compare
L-Asparagine (C) +0.0 +0.0 compare
L-Asparagine (C) -0.0 -0.1 compare
L-Fucose (C) +0.3 +1.3 compare
L-Fucose (C) +0.0 +0.0 compare
L-Glutamic (C) -0.1 -0.3 compare
L-Glutamic (C) +0.1 +0.6 compare
L-Glutamine (C) -0.2 -1.1 compare
L-Glutamine (C) -0.4 -2.1 compare
L-Histidine (C) +0.3 +0.9 compare
L-Histidine (C) +0.2 +0.6 compare
L-Leucine (C) +0.2 +1.2 compare
L-Leucine (C) -0.1 -0.3 compare
L-Malic (C) +0.0 +0.1 compare
L-Malic (C) -0.0 -0.1 compare
L-Phenylalanine (C) -0.0 -0.2 compare
L-Phenylalanine (C) +0.1 +0.3 compare
L-Proline (C) +0.1 +0.6 compare
L-Proline (C) +0.3 +1.6 compare
L-Threonine (C) +0.1 +0.3 compare
L-Threonine (C) +0.0 +0.1 compare
L-Tryptophan (C) -0.1 -0.6 compare
L-Tryptophan (C) +0.2 +0.8 compare
L-tyrosine (C) -0.1 -0.3 compare
L-tyrosine (C) -0.7 -1.4 compare
acetate (C) -0.2 -1.0 compare
acetate (C) -0.3 -1.2 compare
butyrate (C) +0.0 +0.1 compare
butyrate (C) +0.1 +0.4 compare
D,L-Lactate (C) -3.0 -6.5 compare
D,L-Lactate (C) -6.0 -3.5 compare
D-Lactate (C) +0.2 +0.9 compare
Formate (C) -0.2 -0.5 compare
Formate (C) +0.1 +0.5 compare
Fumarate (C) +0.3 +1.5 compare
Fumarate (C) +0.3 +1.2 compare
L-Lactate (C) -6.5 -4.0 compare
L-Lactate (C) -7.5 -5.1 compare
propionate (C) -0.2 -0.8 compare
propionate (C) -0.2 -0.6 compare
pyruvate (C) -0.0 -0.2 compare
pyruvate (C) +0.2 +1.2 compare
succinate (C) +0.1 +0.4 compare
succinate (C) -0.0 -0.2 compare
Tween 20 (C) +0.2 +1.0 compare
Tween 20 (C) -0.4 -1.9 compare
control NP -0.0 -0.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.9 compare
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.7 compare
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.1 +2.3 compare
phage V1_1 -0.1 -0.6 compare
V1_1 -0.4 -2.3 compare
V1_10 +0.2 +0.6 compare
V1_10 +0.4 +1.8 compare
V2_1 +0.0 +0.1 compare
V2_1 +0.1 +0.3 compare
V2_10 -0.2 -0.6 compare
V2_10 +0.2 +0.4 compare
V2_100 +0.3 +1.2 compare
plant outgrowth control Plant outgrowth control +0.1 +0.7 compare
Plant outgrowth control +0.3 +1.0 compare
r2a outgrowth control R2A outgrowth control +0.3 +1.5 compare
R2A outgrowth control +0.2 +0.9 compare
R2A outgrowth control -0.2 -0.7 compare
R2A outgrowth control +0.0 +0.1 compare