Fitness data for ABID97_RS06415 in Variovorax sp. OAS795

sigma-54 dependent transcriptional regulator
SEED: Sigma-54 dependent transcriptional regulator
KEGG: two-component system, NtrC family, response regulator PilR

All 111 fitness values, sorted by group and condition


Add gene:

Or see strongest phenotypes or choose conditions

group condition fitness t score  
carbon source 2-Deoxy-D-Ribose (C) +0.4 +2.6 compare
2-Deoxy-D-Ribose (C) +0.3 +2.0 compare
4-Hydroxybenzoic Acid (C) +0.4 +2.1 compare
4-Hydroxybenzoic Acid (C) +0.0 +0.1 compare
a-Ketoglutaric (C) -0.5 -2.7 compare
a-Ketoglutaric (C) -0.8 -5.9 compare
Adenine (C) -1.4 -9.5 compare
Adenine (C) -1.1 -6.7 compare
casaminos (C) -1.4 -7.7 compare
casaminos (C) -1.0 -5.9 compare
D,L-Malic Acid (C) -1.1 -5.2 compare
D,L-Malic Acid (C) -1.5 -8.9 compare
D-Arabinose (C) -1.6 -9.1 compare
D-Arabinose (C) -1.5 -7.5 compare
D-Fructose (C) -1.0 -6.4 compare
D-Fructose (C) -1.0 -6.8 compare
D-Galactose (C) -1.5 -8.0 compare
D-Galactose (C) -1.1 -6.7 compare
D-Gluconic Acid (C) -1.1 -6.5 compare
D-Gluconic Acid (C) -1.2 -7.5 compare
D-Glucose (C) +1.5 +10.1 compare
D-Glucose (C) +1.3 +9.9 compare
D-Glucuronic Acid (C) +0.3 +1.8 compare
D-Mannose (C) -1.2 -6.7 compare
D-Mannose (C) -1.1 -7.8 compare
D-Ribose (C) -1.2 -6.9 compare
D-Ribose (C) -1.2 -8.4 compare
D-Serine (C) -1.6 -8.1 compare
D-Serine (C) -1.3 -7.8 compare
D-Sorbitol (C) -1.0 -5.9 compare
D-Sorbitol (C) -1.2 -7.6 compare
D-Xylose (C) -0.0 -0.2 compare
D-Xylose (C) +0.1 +0.5 compare
Ethanol (C) -1.1 -5.9 compare
Ethanol (C) -1.1 -6.5 compare
Glucuronamide (C) -1.5 -6.5 compare
Glucuronamide (C) -1.1 -5.8 compare
Gly-Glu (C) -1.4 -8.9 compare
Gly-Glu (C) -1.3 -7.7 compare
Glycerol (C) -1.3 -8.8 compare
Glycerol (C) -1.2 -7.8 compare
Glycolic Acid (C) -0.6 -3.7 compare
Glycolic Acid (C) -1.1 -7.4 compare
L-Alanine (C) -0.9 -4.5 compare
L-Alanine (C) -1.0 -4.9 compare
L-Arabinose (C) -1.7 -7.1 compare
L-Arabinose (C) -1.7 -10.1 compare
L-Asparagine (C) -1.2 -8.5 compare
L-Asparagine (C) -1.3 -8.5 compare
L-Fucose (C) -1.0 -5.6 compare
L-Fucose (C) -1.3 -8.3 compare
L-Glutamic (C) -1.4 -9.1 compare
L-Glutamic (C) -1.4 -8.5 compare
L-Glutamine (C) -1.6 -10.9 compare
L-Glutamine (C) -1.5 -9.7 compare
L-Histidine (C) -0.9 -4.0 compare
L-Histidine (C) -0.8 -4.1 compare
L-Leucine (C) -0.8 -6.5 compare
L-Leucine (C) -1.0 -7.4 compare
L-Malic (C) -2.0 -12.8 compare
L-Malic (C) -1.7 -10.3 compare
L-Phenylalanine (C) +0.8 +6.8 compare
L-Phenylalanine (C) +1.3 +9.8 compare
L-Proline (C) -0.8 -5.2 compare
L-Proline (C) -0.9 -5.9 compare
L-Threonine (C) -0.8 -5.4 compare
L-Threonine (C) -0.8 -5.3 compare
L-Tryptophan (C) -0.2 -1.2 compare
L-Tryptophan (C) -0.1 -0.4 compare
L-tyrosine (C) +0.2 +1.4 compare
L-tyrosine (C) -1.4 -4.3 compare
acetate (C) -0.9 -5.5 compare
acetate (C) -1.1 -6.5 compare
butyrate (C) -1.5 -8.2 compare
butyrate (C) -1.4 -8.4 compare
D,L-Lactate (C) -1.3 -8.0 compare
D,L-Lactate (C) -1.3 -8.4 compare
D-Lactate (C) -1.5 -9.7 compare
Formate (C) -1.1 -6.4 compare
Formate (C) -1.1 -7.2 compare
Fumarate (C) -1.5 -8.9 compare
Fumarate (C) -1.2 -8.1 compare
L-Lactate (C) -1.4 -9.3 compare
L-Lactate (C) -1.3 -7.1 compare
propionate (C) -1.0 -4.6 compare
propionate (C) -1.2 -5.2 compare
pyruvate (C) -1.6 -9.0 compare
pyruvate (C) -1.8 -12.4 compare
succinate (C) -1.6 -10.6 compare
succinate (C) -1.5 -9.6 compare
Tween 20 (C) -1.4 -9.1 compare
Tween 20 (C) -1.1 -7.4 compare
control NP -0.0 -0.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +1.2 compare
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 -0.2 compare
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +2.0 compare
phage V1_1 +0.3 +2.0 compare
V1_1 +0.4 +2.9 compare
V1_10 +3.7 +32.7 compare
V1_10 +3.5 +24.6 compare
V2_1 +0.3 +2.4 compare
V2_1 +0.5 +4.2 compare
V2_10 +3.7 +30.3 compare
V2_10 +3.7 +29.8 compare
V2_100 +7.0 +56.8 compare
plant outgrowth control Plant outgrowth control -0.3 -2.5 compare
Plant outgrowth control -0.1 -0.7 compare
r2a outgrowth control R2A outgrowth control -1.2 -7.5 compare
R2A outgrowth control -1.4 -10.0 compare
R2A outgrowth control -0.4 -2.4 compare
R2A outgrowth control -0.4 -3.2 compare