Fitness data for ABID97_RS04885 in Variovorax sp. OAS795

YbdK family carboxylate-amine ligase
SEED: FIG074102: hypothetical protein
KEGG: carboxylate-amine ligase

All 111 fitness values, sorted by group and condition


Add gene:

Or see strongest phenotypes or choose conditions

group condition fitness t score  
carbon source 2-Deoxy-D-Ribose (C) +0.0 +0.2 compare
2-Deoxy-D-Ribose (C) +0.3 +2.3 compare
4-Hydroxybenzoic Acid (C) +0.0 +0.0 compare
4-Hydroxybenzoic Acid (C) -0.3 -2.2 compare
a-Ketoglutaric (C) +0.7 +5.5 compare
a-Ketoglutaric (C) +0.5 +4.1 compare
Adenine (C) +0.9 +7.2 compare
Adenine (C) +1.2 +9.6 compare
casaminos (C) -0.3 -2.4 compare
casaminos (C) -0.5 -3.3 compare
D,L-Malic Acid (C) -0.1 -0.4 compare
D,L-Malic Acid (C) -3.4 -17.5 compare
D-Arabinose (C) +0.3 +2.1 compare
D-Arabinose (C) +0.3 +2.6 compare
D-Fructose (C) +0.6 +5.1 compare
D-Fructose (C) +0.5 +4.2 compare
D-Galactose (C) +0.2 +1.6 compare
D-Galactose (C) +0.1 +0.8 compare
D-Gluconic Acid (C) +1.1 +8.1 compare
D-Gluconic Acid (C) +1.0 +8.6 compare
D-Glucose (C) +2.5 +20.3 compare
D-Glucose (C) +2.1 +18.3 compare
D-Glucuronic Acid (C) +0.9 +7.8 compare
D-Mannose (C) +1.2 +10.6 compare
D-Mannose (C) +1.0 +8.4 compare
D-Ribose (C) +0.4 +3.1 compare
D-Ribose (C) +0.4 +3.6 compare
D-Serine (C) +0.8 +7.4 compare
D-Serine (C) +0.9 +7.2 compare
D-Sorbitol (C) -0.5 -3.5 compare
D-Sorbitol (C) -0.4 -3.3 compare
D-Xylose (C) +1.1 +8.6 compare
D-Xylose (C) +1.2 +10.2 compare
Ethanol (C) -0.1 -0.4 compare
Ethanol (C) -0.1 -0.9 compare
Glucuronamide (C) +0.7 +5.2 compare
Glucuronamide (C) +0.6 +4.3 compare
Gly-Glu (C) +0.8 +7.3 compare
Gly-Glu (C) +0.6 +4.7 compare
Glycerol (C) -0.7 -5.7 compare
Glycerol (C) -0.6 -4.1 compare
Glycolic Acid (C) +1.4 +11.5 compare
Glycolic Acid (C) +0.4 +3.3 compare
L-Alanine (C) +1.7 +13.7 compare
L-Alanine (C) +1.6 +12.5 compare
L-Arabinose (C) +0.2 +1.3 compare
L-Arabinose (C) +0.1 +1.1 compare
L-Asparagine (C) +0.4 +3.5 compare
L-Asparagine (C) +0.3 +2.1 compare
L-Fucose (C) +0.4 +3.1 compare
L-Fucose (C) +0.3 +2.3 compare
L-Glutamic (C) +0.3 +2.4 compare
L-Glutamic (C) +0.2 +1.6 compare
L-Glutamine (C) +0.2 +1.7 compare
L-Glutamine (C) +0.4 +2.7 compare
L-Histidine (C) +1.7 +10.5 compare
L-Histidine (C) +1.8 +12.0 compare
L-Leucine (C) +1.4 +11.1 compare
L-Leucine (C) +1.5 +11.6 compare
L-Malic (C) -2.7 -14.5 compare
L-Malic (C) -2.6 -17.4 compare
L-Phenylalanine (C) +4.1 +34.3 compare
L-Phenylalanine (C) +4.5 +36.6 compare
L-Proline (C) +1.0 +8.1 compare
L-Proline (C) +0.9 +6.5 compare
L-Threonine (C) +1.1 +9.3 compare
L-Threonine (C) +1.2 +9.4 compare
L-Tryptophan (C) +2.2 +17.5 compare
L-Tryptophan (C) +2.2 +18.5 compare
L-tyrosine (C) +0.2 +1.8 compare
L-tyrosine (C) +0.0 +0.3 compare
acetate (C) +0.4 +3.0 compare
acetate (C) +0.1 +0.9 compare
butyrate (C) +1.9 +16.0 compare
butyrate (C) +1.9 +15.9 compare
D,L-Lactate (C) -1.8 -12.8 compare
D,L-Lactate (C) -1.6 -11.3 compare
D-Lactate (C) -2.2 -13.6 compare
Formate (C) +1.4 +10.2 compare
Formate (C) +1.5 +12.8 compare
Fumarate (C) -1.1 -7.8 compare
Fumarate (C) -1.2 -7.8 compare
L-Lactate (C) -2.2 -13.3 compare
L-Lactate (C) -2.5 -14.5 compare
propionate (C) +1.0 +6.7 compare
propionate (C) +1.4 +7.7 compare
pyruvate (C) -1.7 -10.5 compare
pyruvate (C) -1.6 -11.4 compare
succinate (C) -2.1 -11.6 compare
succinate (C) -2.1 -13.0 compare
Tween 20 (C) -1.6 -10.3 compare
Tween 20 (C) -1.5 -11.0 compare
control NP -1.0 -7.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -3.5 compare
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -2.4 compare
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -4.3 compare
phage V1_1 -0.6 -4.8 compare
V1_1 -0.7 -5.6 compare
V1_10 +2.1 +17.0 compare
V1_10 +2.1 +17.1 compare
V2_1 -0.9 -7.2 compare
V2_1 -1.0 -7.5 compare
V2_10 +2.2 +18.4 compare
V2_10 +2.2 +18.5 compare
V2_100 +5.1 +39.5 compare
plant outgrowth control Plant outgrowth control +0.2 +1.4 compare
Plant outgrowth control +0.1 +0.9 compare
r2a outgrowth control R2A outgrowth control +0.5 +4.0 compare
R2A outgrowth control +0.3 +2.3 compare
R2A outgrowth control +0.0 +0.2 compare
R2A outgrowth control +0.2 +1.1 compare