Fitness data for b4313 in Escherichia coli BW25113

fimE: tyrosine recombinase/inversion of on/off regulator of fimA (NCBI)
SEED: type 1 fimbriae regulatory protein FimE
KEGG: type 1 fimbriae regulatory protein FimE

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 3.9)


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group condition fitness t score  
stress BHIS with Methotrexate 0.06 mM 48 hr +3.9 +27.4 compare
predation 48 hr rep2_HD100_100fold_dilution +4.0 +26.1 compare
predation 3 hr rep1_Tiberius_10fold_dilution +4.0 +23.2 compare
predation 3 hr rep1_HD100_no_dilution +4.0 +28.6 compare
mixed community Mixed culture; Bdellovibrio bacteriovorus HD100 1:1 starting OD to Ecoli; 0.02X nutrient broth; outgrowth in LBwithKan +4.0 +23.6 compare
phage Goslar +4.1 +28.5 compare
stress BHIS with Methotrexate 0.1 mM 48 hr +4.1 +28.3 compare
predation 3 hr rep1_HD100_100fold_dilution +4.1 +24.1 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 +4.1 +13.8 compare
predation 3 hr rep1_Tiberius_no_dilution +4.2 +24.8 compare
predation 3 hr rep1_Tiberius_100fold_dilution +4.2 +27.5 compare
predation 48 hr rep3_Tiberius_10fold_dilution +4.3 +28.4 compare
phage NpK +4.3 +23.9 compare
predation 3 hr rep1_Tiberius_10fold_dilution +4.4 +27.5 compare
predation 3 hr rep1_Tiberius_100fold_dilution +4.4 +25.1 compare
nopredatorcontrol 3 hr NoPredatorControl +4.4 +24.0 compare
mixed community Mixed culture; Bdellovibrio bacteriovorus str. Tiberius 1:10 starting OD to Ecoli; 0.02X nutrient broth; outgrowth in LBwithKan +4.7 +29.6 compare
mixed community Mixed culture; Bdellovibrio bacteriovorus str. Tiberius 1:10 starting OD to Ecoli; 0.02X nutrient broth; outgrowth in LBwithKan +5.1 +31.3 compare
nopredatorcontrol 48 hr NoPredatorControl +5.3 +31.1 compare
phage NpK +5.4 +29.1 compare