Fitness data for b4311 in Escherichia coli BW25113

yjhA: orf, hypothetical protein (VIMSS)
SEED: N-acetylneuraminic acid outer membrane channel protein NanC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source carbon source D-Mannose 0.5mM -1.0 -4.7 compare
M9 Glucose 2% anaerobic -0.8 -5.7 compare
M9 Acetate 0.5% aerobic -0.8 -5.3 compare
M9 Glucose 2%, 20 mM NO3- anaerobic -0.8 -5.1 compare
M9 Glucose 2% aerobic -0.7 -4.8 compare
M9 Acetate 0.5% aerobic -0.7 -4.9 compare
motility outer cut, LB soft agar motility assay -0.7 -3.8 compare
M9 Glucose 2% aerobic -0.7 -4.2 compare
stress Benzalkonium Chloride 0.004 mg/ml -0.7 -3.6 compare
predation 3 hr rep1_Tiberius_100fold_dilution -0.6 -4.1 compare
M9 Glucose 2% anaerobic -0.6 -4.5 compare
predation 3 hr rep1_Tiberius_10fold_dilution -0.5 -4.1 compare
mixed community Mixed culture; Bdellovibrio bacteriovorus HD100 1:10 starting OD to Ecoli; 0.1X M9; outgrowth in LBwithKan -0.5 -4.1 compare
phage N4_phage 0.009375 MOI TC2 +0.5 +3.2 compare
phage Ste41 +0.5 +2.9 compare
phage Papa dilution 10-1 cacl2 maltose +0.5 +3.0 compare
phage Phage_N4_cage_4_mouse_2_Cecum_40 hr +0.6 +3.2 compare
stress LB Aerobic with Irgasan 0.0000003125 mM +0.6 +3.1 compare
carbon source carbon source D-Mannose 5mM +0.6 +2.7 compare
attachment_assay_attached_sample Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB +0.7 +3.6 compare