Fitness data for b4304 in Escherichia coli BW25113

sgcC: KpLE2 phage-like element; predicted phosphotransferase enzyme IIC component (NCBI)
SEED: PTS system, galactitol-specific IIC component (EC 2.7.1.69)
KEGG: PTS system, galactitol-specific IIC component

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM -0.8 -2.8 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay -0.7 -2.6 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay -0.7 -2.9 compare
carbon source carbon source D-Mannose 20mM -0.5 -2.4 compare
plasmid transformation vcDART vector transformation; agar assay -0.4 -2.9 compare
stress LB Anaerobic with Mecillinam 0.0000078125 mM -0.4 -2.3 compare
stress LB Anaerobic with Ciprofloxacin Hydrochloride 0.00000001953125 mM -0.4 -2.5 compare
carbon source Inosine 0.3728 mM (C) -0.3 -2.3 compare
carbon source Ying_Nucleobase14 rep B; time point 3 -0.3 -1.7 compare
no phage control Control_TnI -0.3 -2.2 compare
stress LB Anaerobic with Ceftriaxone hemi(heptahydrate) 0.000000625 mM -0.3 -1.9 compare
attachment_assay_attached_sample Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -0.3 -1.4 compare
carbon source Guanosine 0.35306 mM (C) -0.3 -2.3 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay -0.3 -1.4 compare
stress LB Anaerobic with Spiramycin 0.00003125 mM +0.3 +2.0 compare
stress LB Aerobic with Zinc Pyrithione 0.0000025 mM +0.3 +1.4 compare
control PBS_cage_2_mouse_1_Cecum_40 hr +0.3 +1.5 compare
stress LB Anaerobic with Phenazine ethosulfate 0.000125 mM +0.4 +2.3 compare
carbon source carbon source D-Mannose 0.5mM +0.4 +1.7 compare
motility inner cut, LB soft agar motility assay +0.5 +2.3 compare