Fitness data for b4135 in Escherichia coli BW25113

yjdC: orf, hypothetical protein (VIMSS)
SEED: Transcriptional regulator, TetR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
motility outer cut, LB soft agar motility assay -0.8 -2.7 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.7 +5.3 compare
control PBS_cage_1_mice _Feces_40 hr +0.7 +2.7 compare
carbon source Ying_Nucleobase14 rep A; time point 1 +0.7 +6.5 compare
carbon source Ying_sugar7 rep A; time point 3 +0.7 +4.8 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.7 +4.8 compare
control PBS_cage_1_mice _Feces_22 hr +0.8 +2.8 compare
carbon source Ying_Nucleobase14 rep C; time point 2 +0.8 +6.0 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM +0.8 +5.8 compare
carbon source Ying_sugar7 rep B; time point 3 +0.8 +6.7 compare
carbon source Ying_Nucleobase14 rep B; time point 2 +0.8 +5.3 compare
carbon source carbon source D-Mannose 20mM +0.9 +4.8 compare
carbon source Ying_sugar7 rep C; time point 3 +0.9 +4.7 compare
carbon source Ying_Nucleobase14 rep A; time point 2 +0.9 +7.0 compare
control PBS_cage_1_mice _Feces_16 hr +0.9 +2.7 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x +1.0 +7.2 compare
carbon source Ying_Nucleobase14 rep C; time point 3 +1.0 +6.2 compare
carbon source Ying_Nucleobase14 rep A; time point 3 +1.1 +8.5 compare
carbon source Ying_Nucleobase14 rep B; time point 3 +1.1 +6.4 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x +1.1 +8.0 compare