Fitness data for b4039 in Escherichia coli BW25113

ubiC: chorismate lyase (VIMSS)
SEED: Chorismate--pyruvate lyase (EC 4.1.3.40)
KEGG: chorismate--pyruvate lyase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source carbon source D-Glucose 0.25mM -1.5 -3.1 compare
msc 22hr_mediaonly_rep2_lowinoculum -1.2 -6.4 compare
carbon source Ying_AminoAcid20 rep C; time point 3 -1.2 -5.3 compare
carbon source Ying_AminoAcid20 rep B; time point 3 -1.1 -5.1 compare
carbon source Ying_AminoAcid20 rep A; time point 3 -1.1 -4.7 compare
carbon source Ying_AminoAcid20 rep A; time point 2 -1.1 -4.9 compare
carbon source L-Malic (C) -1.0 -5.3 compare
carbon source Ying_AminoAcid20 rep C; time point 2 -1.0 -5.4 compare
carbon source carbon source D-Glucose 5mM -0.9 -3.0 compare
carbon source Ying_AminoAcid20 rep B; time point 2 -0.9 -5.1 compare
msc 22hr_mediaonly_rep1_lowinoculum -0.9 -3.1 compare
stress LB Anaerobic with Nitrofurantoin 0.000015625 mM -0.9 -3.5 compare
carbon source LMW_DNA_from_Lysinibacillus_FW301-JW8 7.7 ppm (C) -0.9 -5.1 compare
stress LB Anaerobic with Chlorhexidine diacetate salt 0.000000625 mM -0.9 -3.8 compare
control PBS_cage_1_mouse_2_Cecum_40 hr -0.8 -2.5 compare
carbon source Ying_AminoAcid20 rep A; time point 1 -0.8 -3.4 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay -0.8 -2.1 compare
control PBS_cage_2_mouse_1_Cecum_40 hr -0.7 -1.8 compare
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM +0.9 +2.6 compare
stress Cephalothin 0.01 mg/ml +0.9 +2.7 compare