Fitness data for b3995 in Escherichia coli BW25113

rsd: stationary phase protein, binds sigma 70 RNA polymerase subunit (NCBI)
SEED: Regulator of sigma D
KEGG: regulator of sigma D

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
phage Phage_N4_cage_3_mouse_4_Cecum_40 hr -1.0 -2.2 compare
control PBS_cage_2_mice _Feces_22 hr -0.9 -2.3 compare
phage Phage_N4_cage_4_mouse_2_Cecum_40 hr -0.9 -2.0 compare
phage Phage_N4_cage_4_mice _Feces_40 hr -0.9 -2.1 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay -0.8 -2.2 compare
phage Phage_N4_cage_4_mouse_3_Cecum_40 hr -0.8 -2.0 compare
control PBS_cage_1_mouse_1_Cecum_40 hr -0.8 -1.3 compare
control PBS_cage_2_mouse_2_Cecum_40 hr -0.8 -1.7 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -0.8 -2.5 compare
stress LB Aerobic with Phenazine ethosulfate 0.0000625 mM +0.8 +2.7 compare
carbon source acetate (C) +0.8 +2.9 compare
carbon source Glycolic Acid (C) +0.8 +2.6 compare
carbon source Glycolic Acid (C) +0.8 +2.9 compare
carbon source Acetate (C) +0.9 +4.6 compare
carbon source Acetate (C) +1.0 +5.2 compare
carbon source L-Malic (C) +1.1 +3.9 compare
carbon source succinate (C) +1.1 +4.6 compare
stress Cephalothin 0.01 mg/ml +1.1 +2.8 compare
carbon source succinate (C) +1.1 +4.7 compare
carbon source L-Malic (C) +1.4 +5.7 compare