Fitness data for b3887 in Escherichia coli BW25113

dtd: D-tyrosyl-tRNA deacylase (NCBI)
SEED: D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1)
KEGG: D-tyrosyl-tRNA(Tyr) deacylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage T7_phage 0.00015625 MOI TC4 -1.1 -4.9 compare
carbon source carbon source D-Mannose 1mM -0.9 -2.9 compare
phage Δdbn_10 -0.9 -2.6 compare
motility outer cut, LB soft agar motility assay -0.7 -2.4 compare
phage T7_phage 0.0015625 MOI TC2 -0.7 -2.7 compare
no stress control anaerobic M9 no stress control; Anaerobic 48 hr -0.7 -5.1 compare
stress M9 Anaerobic 5-Fluorodihydropyrimidine-2,4-dione 500 uM -0.6 -4.3 compare
no stress control anaerobic M9 no stress control; Anaerobic 48 hr -0.6 -4.2 compare
stress LB Aerobic with Irgasan 0.0000003125 mM -0.6 -1.6 compare
phage T7_phage 0.00015625 MOI TC3 -0.6 -2.6 compare
m9 anaerobic no stress control M9 anaerobic no stress control -0.6 -4.3 compare
stress M9 Anaerobic 5-Fluorodihydropyrimidine-2,4-dione 500 uM -0.6 -4.3 compare
phage NpK -0.5 -2.7 compare
m9 anaerobic no stress control M9 anaerobic no stress control -0.5 -4.2 compare
carbon source Ying_sugar7 rep A; time point 3 -0.5 -4.0 compare
no stress control M9 no stress control; Dimethyl Sulfoxide 1 vol% 24 hr -0.5 -3.3 compare
control PBS_cage_1_mice _Feces_40 hr +0.6 +1.8 compare
mixed community control; abiotic network mixed community control; abiotic network +0.6 +1.5 compare
control PBS_cage_1_mice _Feces_22 hr +0.6 +1.8 compare
control PBS_cage_1_mice _Feces_16 hr +0.7 +1.8 compare