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  • Fitness data for b3875 in Escherichia coli BW25113

    ompL: predicted outer membrane porin L (NCBI)
    SEED: Outer membrane sugar transport protein YshA

    Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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    group condition fitness t score  
    phage Phage_N4_cage_3_mouse_3_Cecum_40 hr -1.4 -3.8 compare
    M9 Glucose 2%, 20 mM NO3- anaerobic -1.3 -7.2 compare
    carbon source carbon source D-Mannose 0.5mM -1.3 -3.5 compare
    M9 Glucose 2% aerobic -1.2 -6.4 compare
    M9 Glucose 2% anaerobic -1.2 -6.0 compare
    M9 Acetate 0.5% aerobic -1.1 -4.3 compare
    motility outer cut, LB soft agar motility assay -1.1 -3.9 compare
    M9 Glucose 2% aerobic -1.0 -4.3 compare
    carbon source carbon source D-Glucose 0.25mM -1.0 -2.6 compare
    no phage control CTR +1.0 +3.1 compare
    stress M9 Aerobic 5'-Deoxy-5-fluorocytidine 500 uM +1.0 +2.4 compare
    no phage control CTR +1.1 +2.7 compare
    stress LB Anaerobic with Cefoxitin 0.000003125 mM +1.1 +2.5 compare
    phage N4_phage 0.009375 MOI TC2 +1.1 +3.5 compare
    mixed community control mixed community control +1.2 +4.2 compare
    stress LB Aerobic with Irgasan 0.0000003125 mM +1.2 +2.5 compare
    stress LB Aerobic with Phenazine ethosulfate 0.0000625 mM +1.2 +1.8 compare
    stress M9 with Methotrexate 1.98 mM 24 hr +1.3 +4.0 compare
    phage Papa dilution 10-1 cacl2 maltose +1.3 +1.9 compare
    stress M9 Aerobic 5'-Deoxy-5-fluorocytidine 500 uM +1.3 +3.6 compare