Fitness data for b3645 in Escherichia coli BW25113

dinD: DNA-damage-inducible protein (VIMSS)
SEED: DNA-damage-inducible protein D
KEGG: DNA-damage-inducible protein D

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
control PBS_cage_1_mice _Feces_22 hr -0.5 -2.5 compare
stress 3-methyl-1-butanol 1.25 vol% -0.5 -2.4 compare
stress 3-methyl-1-butanol 1.25 vol% -0.4 -1.8 compare
protonated/deuterated deuterated glucose in H2O -0.4 -2.6 compare
control PBS_cage_1_mouse_1_Cecum_40 hr -0.4 -1.7 compare
toxin CA_0.05 -0.4 -2.4 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay -0.4 -1.9 compare
msc 22hr_MSC_rep1_highinoculum -0.3 -1.9 compare
control PBS_cage_1_mice _Feces_40 hr -0.3 -1.6 compare
bacterial adhesion 1/2ON stiff +0.3 +2.4 compare
predation 6 hr rep1_HD100_10fold_dilution_grewON +0.3 +1.4 compare
stress LB Aerobic with Irgasan 0.0000003125 mM +0.3 +1.2 compare
phage Phage_N4_cage_3_mouse_4_Cecum_40 hr +0.3 +1.3 compare
stress Dimethyl Sulfoxide 10 vol% +0.3 +2.4 compare
stress LB Aerobic with Doxycycline hyclate 0.00000625 mM +0.3 +2.1 compare
bacterial adhesion 1/2ON soft +0.4 +2.8 compare
attachment_assay_attached_sample Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB +0.4 +1.8 compare
phage T7_phage 0.00015625 MOI TC3 +0.4 +2.1 compare
motility outer cut, LB soft agar motility assay +0.5 +1.9 compare
stress LB Aerobic with Zinc Pyrithione 0.0000025 mM +0.5 +1.8 compare