Fitness data for b3422 in Escherichia coli BW25113

rtcR: sigma 54-dependent transcriptional regulator of rtcBA expression (NCBI)
SEED: Transcriptional regulatory protein RtcR
KEGG: transcriptional regulatory protein RtcR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage T7_phage 0.00015625 MOI TC4 -0.7 -2.7 compare
phage T7_phage 0.0015625 MOI TC2 -0.6 -2.4 compare
phage T7_phage 0.0015625 MOI TC1 -0.6 -3.0 compare
control PBS_cage_1_mice _Feces_16 hr -0.5 -2.6 compare
control PBS_cage_1_mice _Feces_22 hr -0.5 -2.3 compare
no phage control CTR -0.4 -2.3 compare
phage T7_phage 0.00015625 MOI TC3 -0.4 -1.5 compare
control PBS_cage_1_mice _Feces_40 hr -0.4 -2.0 compare
no phage control CTR -0.4 -1.9 compare
phage Phage_N4_cage_3_mouse_3_Cecum_40 hr -0.4 -1.7 compare
stress Ciprofloxacin Hydrochloride 0.0003 mM -0.3 -1.6 compare
stress Cephalothin 0.01 mg/ml -0.3 -1.9 compare
control PBS_cage_1_mouse_2_Cecum_40 hr -0.3 -1.6 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -0.3 -1.6 compare
stress Bacitracin 1 mg/ml +0.3 +1.9 compare
phage Mnm2 +0.3 +2.3 compare
phage Ste41 +0.4 +1.6 compare
motility outer cut, LB soft agar motility assay +0.4 +1.6 compare
phage PoolT9D25 +0.4 +2.0 compare
phage Papa dilution 10-1 cacl2 maltose +1.5 +10.7 compare