Fitness data for b3395 in Escherichia coli BW25113

yrfD: orf, hypothetical protein (VIMSS)
SEED: Type IV pilus biogenesis protein PilM
KEGG: pilus assembly protein HofM

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
motility inner cut, LB soft agar motility assay -0.6 -2.5 compare
phage T7_phage 0.00015625 MOI TC3 -0.6 -1.9 compare
stress LB Anaerobic with Sulfamonomethoxine 0.0000625 mM -0.6 -2.7 compare
nitrogen source L-Arginine (N) -0.5 -2.7 compare
stress Chloramphenicol 0.005 mg/ml -0.4 -2.3 compare
stress Dimethyl Sulfoxide 7.5 vol% -0.4 -2.3 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay -0.4 -1.7 compare
msc 22hr_mediaonly_rep1_lowinoculum -0.4 -1.8 compare
stress LB Aerobic with Trimethoprim 0.00000125 mM +0.4 +2.7 compare
stress LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM +0.4 +2.3 compare
carbon source carbon source D-Mannose 1mM +0.4 +1.9 compare
balo Mixed culture, Halobacteriovorax-10 +0.5 +2.0 compare
stress LB Aerobic with Nitrofurantoin 0.00003125 mM +0.5 +2.2 compare
control PBS_cage_1_mouse_2_Cecum_40 hr +0.5 +2.0 compare
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM +0.5 +2.5 compare
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM +0.6 +2.1 compare
control PBS_cage_1_mice _Feces_22 hr +0.7 +2.0 compare
control PBS_cage_1_mice _Feces_40 hr +0.9 +2.8 compare
stress octanol 0.08 vol% +0.9 +2.8 compare
control PBS_cage_1_mice _Feces_16 hr +1.0 +2.9 compare