Fitness data for b3068 in Escherichia coli BW25113

ygjF: G/U mismatch-specific DNA glycosylase (NCBI)
SEED: G:T/U mismatch-specific uracil/thymine DNA-glycosylase
KEGG: TDG/mug DNA glycosylase family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
protonated/deuterated deuterated glucose in H2O -1.5 -1.7 compare
phage Δdbn_10 -1.5 -1.4 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -1.5 -2.1 compare
stress Cisplatin 0.05 mg/ml -1.5 -2.7 compare
gfp_control GFP_control -1.2 -2.5 compare
phage Phage_N4_cage_4_mouse_2_Cecum_40 hr -1.1 -1.9 compare
ppi ppI -1.1 -3.4 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -1.0 -4.2 compare
msc 22hr_MSC_rep1_highinoculum -1.0 -2.5 compare
msc 3hr_MSC_rep1_lowinoculum -1.0 -2.2 compare
gfp_control GFP_control -1.0 -1.4 compare
nitrogen source Ammonium chloride (N) -1.0 -2.0 compare
stress Chloramphenicol 0.005 mg/ml -1.0 -1.5 compare
phage Ste41 +1.0 +1.0 compare
phage RB68 +1.0 +3.7 compare
control PBS_cage_1_mice _Feces_22 hr +1.0 +3.1 compare
stress 3-methyl-1-butanol 1.25 vol% +1.1 +2.4 compare
phage R2_N4_T2_phage10 +1.1 +1.5 compare
control PBS_cage_1_mice _Feces_16 hr +1.2 +3.3 compare
motility outer cut, LB soft agar motility assay +1.8 +2.0 compare