Fitness data for b3020 in Escherichia coli BW25113

ygiS: predicted transporter subunit: periplasmic-binding component of ABC superfamily (NCBI)
SEED: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
KEGG: peptide/nickel transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
plasmid transformation vcDART vector transformation; liquid outgrowth assay -0.4 -1.9 compare
gfp_control GFP_control -0.4 -2.1 compare
phage Ste41 -0.4 -1.6 compare
mixed community Mixed culture; Bdellovibrio bacteriovorus str. Tiberius 1:10 starting OD to Ecoli; 0.1X M9; outgrowth in LBwithKan -0.3 -2.4 compare
retron_ec_48_control retron_Ec_48_control -0.3 -2.2 compare
drt_type_3 DRT_type_3 -0.3 -2.1 compare
ppi ppI -0.3 -2.2 compare
sir2-hera SIR2-HerA -0.3 -1.9 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay -0.3 -1.9 compare
stress Aluminum chloride 5 mM -0.3 -1.4 compare
retron_ec_48_control retron_Ec_48_control -0.3 -1.8 compare
msc 22hr_MSC_rep1_highinoculum +0.3 +1.6 compare
stress LB Aerobic with Doxycycline hyclate 0.0000015625 mM +0.3 +2.0 compare
stress 3-methyl-1-butanol 2.5 vol% +0.3 +2.0 compare
balo Mixed culture, Halobacteriovorax-1 +0.3 +2.0 compare
stress Cisplatin 0.1 mg/ml +0.3 +1.3 compare
protonated/deuterated protonated control +0.3 +2.3 compare
phage R2_N4_T1_phage10 +0.3 +1.5 compare
carbon source carbon source D-Mannose 5mM +0.3 +1.6 compare
phage R2_N4_T2_phage10 +0.3 +1.7 compare