Fitness data for b3020 in Escherichia coli BW25113
ygiS: predicted transporter subunit: periplasmic-binding component of ABC superfamily (NCBI)
SEED: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
KEGG: peptide/nickel transport system substrate-binding protein
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)
Or see all 1335 experiments or choose conditions
| group | condition | fitness | t score | |
|---|---|---|---|---|
| plasmid transformation | vcDART vector transformation; liquid outgrowth assay | -0.4 | -1.9 | compare |
| gfp_control | GFP_control | -0.4 | -2.1 | compare |
| phage | Ste41 | -0.4 | -1.6 | compare |
| mixed community control; abiotic network | mixed community control; abiotic network | -0.4 | -1.2 | compare |
| mixed community | Mixed culture; Bdellovibrio bacteriovorus str. Tiberius 1:10 starting OD to Ecoli; 0.1X M9; outgrowth in LBwithKan | -0.3 | -2.4 | compare |
| retron_ec_48_control | retron_Ec_48_control | -0.3 | -2.2 | compare |
| drt_type_3 | DRT_type_3 | -0.3 | -2.1 | compare |
| ppi | ppI | -0.3 | -2.2 | compare |
| sir2-hera | SIR2-HerA | -0.3 | -1.9 | compare |
| phage | Goslar | -0.3 | -1.7 | compare |
| plasmid transformation | vcDART vector transformation; liquid outgrowth assay | -0.3 | -1.9 | compare |
| stress | Aluminum chloride 5 mM | -0.3 | -1.4 | compare |
| protonated/deuterated | protonated control | +0.3 | +2.3 | compare |
| toxin | GL_4 | +0.3 | +1.7 | compare |
| phage | R2_N4_T1_phage10 | +0.3 | +1.5 | compare |
| no phage control | NophageCTRB12 | +0.3 | +1.4 | compare |
| carbon source | carbon source D-Mannose 5mM | +0.3 | +1.6 | compare |
| phage | R2_N4_T2_phage10 | +0.3 | +1.7 | compare |
| no phage control | NophageCTRA12 | +0.4 | +1.8 | compare |
| mixed community control | mixed community control | +0.5 | +2.3 | compare |