Fitness data for b2955 in Escherichia coli BW25113

yggW: coproporphyrinogen III oxidase (NCBI)
SEED: Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB
KEGG: oxygen-independent coproporphyrinogen III oxidase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
phage Δdbn_10 -1.2 -2.5 compare
stress LB Aerobic with Ramoplanin 0.000125 mM -1.1 -4.2 compare
stress Chloramphenicol 0.0025 mg/ml -1.1 -4.1 compare
phage T7_phage 0.00015625 MOI TC4 -1.1 -2.9 compare
predation 6 hr rep2_HD100_10fold_dilution_grewON -1.0 -2.0 compare
stress Chloramphenicol 0.001 mg/ml -1.0 -3.8 compare
phage T7_phage 0.00015625 MOI TC2 -1.0 -4.1 compare
stress LB Aerobic with Irgasan 0.0000003125 mM -0.9 -2.6 compare
carbon source Ying_Nucleobase14 rep A; time point 3 -0.9 -6.2 compare
stress LB Aerobic with Ramoplanin 0.000125 mM -0.9 -3.2 compare
carbon source Ying_Nucleobase14 rep B; time point 3 -0.8 -3.8 compare
carbon source Ying_Nucleobase14 rep C; time point 3 -0.8 -4.7 compare
stress LB Anaerobic with Chloramphenicol 0.00000390625 mM -0.8 -3.0 compare
stress LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM -0.8 -3.5 compare
carbon source Ying_Nucleobase14 rep A; time point 2 -0.7 -4.3 compare
stress LB Anaerobic with Chloramphenicol 0.000001953125 mM -0.7 -3.2 compare
stress LB Anaerobic with Nitrofurantoin 0.00003125 mM -0.7 -2.4 compare
carbon source L-Malic (C) +0.7 +4.2 compare
stress Benzalkonium Chloride 0.004 mg/ml +0.9 +3.2 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay +0.9 +2.2 compare