Fitness data for b2798 in Escherichia coli BW25113

ygdG: Ssb-binding protein, misidentified as ExoIX (RefSeq)
SEED: DNA polymerase I (EC 2.7.7.7)
KEGG: protein Xni

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage HSDP4 -0.9 -0.9 compare
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM -0.9 -1.8 compare
no phage control CTR -0.8 -1.9 compare
stress Trimethoprim 0.0025 mM -0.8 -3.0 compare
control PBS_cage_2_mouse_1_Cecum_40 hr -0.8 -1.4 compare
carbon source Ying_Others16 rep B; time point 2 -0.7 -1.9 compare
stress LB Aerobic with Ramoplanin 0.000125 mM -0.7 -2.4 compare
carbon source Dodecanol and Rhamnolipid (C) -0.7 -1.9 compare
stress 3-methyl-1-butanol 1.25 vol% -0.7 -1.2 compare
stress LB Anaerobic with Spiramycin 0.00003125 mM -0.6 -2.8 compare
predation 6 hr rep2_HD100_10fold_dilution_grewON -0.6 -1.0 compare
stress LB Aerobic with Nitrofurantoin 0.00003125 mM +0.6 +1.6 compare
stress 2-Furfuraldehyde 0.25 vol% +0.6 +1.9 compare
phage PoolT9D26 +0.6 +1.6 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB +0.6 +3.2 compare
stress LB Aerobic with Irgasan 0.0000003125 mM +0.7 +2.2 compare
stress 2-Furfuraldehyde 0.125 vol% +0.7 +2.9 compare
stress 5-Hydroxymethylfurfural 20 mM +0.8 +3.3 compare
control PBS_cage_1_mice _Feces_16 hr +0.9 +1.6 compare
control PBS_cage_1_mice _Feces_22 hr +0.9 +1.8 compare