Fitness data for b2776 in Escherichia coli BW25113

ygcE: predicted kinase (NCBI)
SEED: Uncharacterized sugar kinase YgcE (EC 2.7.1.-)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage Δdbn_10 -0.7 -1.9 compare
motility outer cut, LB soft agar motility assay -0.7 -2.5 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay -0.6 -2.0 compare
phage T7_phage 0.00015625 MOI TC3 -0.5 -2.1 compare
control PBS_cage_1_mice _Feces_16 hr -0.5 -1.8 compare
phage PoolT9D25 -0.4 -2.5 compare
control PBS_cage_2_mice _Feces_22 hr -0.4 -2.1 compare
control PBS_cage_1_mouse_2_Cecum_40 hr -0.4 -1.6 compare
attachment_assay_attached_sample Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -0.4 -1.6 compare
stress 3-methyl-1-butanol 1.25 vol% -0.4 -1.9 compare
stress Benzalkonium Chloride 0.004 mg/ml -0.4 -1.6 compare
stress 3-methyl-1-butanol 1.25 vol% -0.4 -2.0 compare
mixed community control mixed community control -0.4 -1.3 compare
phage PoolT9D19 +0.4 +1.4 compare
phage HSDP4 +0.5 +1.7 compare
no phage control Control_KEIO +0.5 +3.3 compare
motility inner cut, LB soft agar motility assay +0.6 +2.2 compare
predation 6 hr rep2_HD100_10fold_dilution_grewON +0.6 +2.1 compare
no phage control CTR +0.6 +2.0 compare
phage Ste41 +0.6 +2.4 compare