Fitness data for b2740 in Escherichia coli BW25113

ygbN: predicted transporter (NCBI)
SEED: Gluconate permease
KEGG: gluconate:H+ symporter, GntP family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source carbon source D-Glucose 0.25mM -0.7 -2.2 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay -0.6 -1.9 compare
carbon source carbon source D-Mannose 0.5mM -0.5 -1.9 compare
phage Δdbn_10 -0.4 -1.4 compare
phage T7_phage 0.0015625 MOI TC2 -0.4 -1.4 compare
stress Cisplatin 0.1 mg/ml -0.4 -1.6 compare
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM -0.4 -2.1 compare
nophagecontrol T4_T2_phage0 -0.4 -2.8 compare
control PBS_cage_1_mouse_1_Cecum_40 hr -0.4 -1.3 compare
stress LB Anaerobic with Amoxicillin 0.0000078125 mM -0.4 -2.0 compare
stress LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM -0.3 -1.9 compare
carbon source carbon source D-Glucose 20mM -0.3 -1.4 compare
stress Dimethyl Sulfoxide 10 vol% -0.3 -1.9 compare
stress Benzalkonium Chloride 0.004 mg/ml +0.3 +1.3 compare
phage Phage_N4_cage_3_mouse_1_Cecum_40 hr +0.4 +1.6 compare
phage Phage_N4_cage_3_mice _Feces_16 hr +0.4 +1.7 compare
phage Phage_N4_cage_3_mouse_4_Cecum_40 hr +0.5 +1.9 compare
phage Phage_N4_cage_3_mice _Feces_40 hr +0.5 +2.3 compare
phage Phage_N4_cage_3_mouse_2_Cecum_40 hr +0.5 +2.3 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB +0.5 +2.2 compare