Fitness data for b2726 in Escherichia coli BW25113

hypA: protein involved in nickel insertion into hydrogenases 3 (NCBI)
SEED: [NiFe] hydrogenase nickel incorporation protein HypA
KEGG: hydrogenase nickel incorporation protein HypA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
phage RhdML5 -2.7 -3.8 compare
predation 6 hr rep1_HD100_10fold_dilution_grewON -1.8 -2.1 compare
stress Ciprofloxacin Hydrochloride 0.0024 mM -1.3 -1.9 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -1.2 -2.2 compare
predation 6 hr rep2_HD100_10fold_dilution_grewON -1.1 -1.3 compare
motility outer cut, LB soft agar motility assay -1.1 -1.8 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay -1.1 -1.9 compare
phage T7_phage 0.00015625 MOI TC4 -1.0 -2.0 compare
phage Phage_N4_cage_3_mouse_1_Cecum_40 hr -1.0 -2.5 compare
phage PoolT9D26 -0.9 -2.8 compare
phage Ste41 -0.9 -1.4 compare
nitrogen source Cytidine (N) -0.9 -3.0 compare
phage T7_phage 0.0015625 MOI TC1 -0.8 -2.0 compare
stress LB Aerobic with Ramoplanin 0.000125 mM -0.8 -2.6 compare
stress LB Anaerobic with Ramoplanin 0.0000625 mM -0.8 -1.8 compare
stress Benzalkonium Chloride 0.004 mg/ml +0.8 +1.9 compare
phage N4_phage 0.0009375 MOI TC3 +0.9 +2.3 compare
phage Goslar +0.9 +2.2 compare
motility inner cut, LB soft agar motility assay +0.9 +1.3 compare
stress Chloride 750 mM +0.9 +2.9 compare