Fitness data for b2579 in Escherichia coli BW25113

yfiD: pyruvate formate lyase subunit (NCBI)
SEED: Pyruvate formate-lyase (EC 2.3.1.54)
KEGG: autonomous glycyl radical cofactor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.7)


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group condition fitness t score  
carbon source carbon source D-Glucose 5mM -5.5 -2.1 compare
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM -3.3 -2.0 compare
stress LB Anaerobic with Nitrofurantoin 0.00003125 mM -3.3 -1.9 compare
carbon source carbon source D-Mannose 0.5mM -3.3 -2.0 compare
gfp_control GFP_control -2.8 -2.4 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay -2.6 -2.0 compare
attachment_assay_attached_sample Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -2.6 -1.7 compare
phage NpK -2.5 -2.3 compare
vitamin M9 with Pyridoxine HCl 20 nM and 4-Deoxypyridoxine 0.25 uM -2.4 -4.0 compare
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM -2.4 -2.1 compare
stress LB Anaerobic with Nitrofurantoin 0.000015625 mM -2.3 -2.6 compare
stress LB Anaerobic with Nitrofurantoin 0.000015625 mM -2.2 -2.5 compare
phage P2 dilution 10-1 cacl2 -2.2 -3.1 compare
stress Cisplatin 0.1 mg/ml -2.0 -2.1 compare
stress LB Anaerobic with Spiramycin 0.00003125 mM -2.0 -2.7 compare
retron_ec_48_control retron_Ec_48_control -2.0 -1.9 compare
control PBS_cage_2_mouse_2_Cecum_40 hr -1.9 -1.4 compare
phage PoolT9D23 -1.7 -1.5 compare
phage T7_phage 0.00015625 MOI TC3 +1.8 +2.0 compare
stress nitrite 10 mM +1.8 +2.2 compare