Fitness data for b2564 in Escherichia coli BW25113

pdxJ: pyridoxal phosphate biosynthetic protein (NCBI)
SEED: Pyridoxine 5'-phosphate synthase (EC 2.6.99.2)
KEGG: pyridoxine 5-phosphate synthase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 4.2)


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group condition fitness t score  
carbon source Glucose (C) -6.0 -7.1 compare
carbon source Glucose (C) -5.2 -7.2 compare
stress M9 with Methotrexate 0.06 mM 24 hr -5.2 -8.0 compare
no stress control M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr -5.2 -8.0 compare
M9 Glucose 2% aerobic -5.2 -9.6 compare
stress M9 with Methotrexate 0.1 mM 48 hr -5.2 -7.9 compare
nitrogen source Putrescine (N) -4.9 -3.4 compare
carbon source D-Glucose-6-Phosphate (C) -4.8 -3.3 compare
no stress control M9 no stress control; Dimethyl Sulfoxide 1 vol% 24 hr -4.8 -9.6 compare
carbon source Glycerol (C) -4.7 -3.3 compare
stress M9 with Methotrexate 0.1 mM 24 hr -4.6 -7.7 compare
carbon source acetate (C) -4.5 -3.1 compare
carbon source Casamino-acids -4.5 -7.2 compare
carbon source D-Lactate (C) -4.3 -5.1 compare
no stress control M9 no stress control; Dimethyl Sulfoxide 1 vol% 24 hr -4.3 -7.1 compare
M9 Glucose 2% aerobic -4.3 -13.0 compare
carbon source D-Glucose (C) MOPS -4.3 -4.1 compare
nitrogen source Glycine (N) -4.2 -5.0 compare
carbon source D-Galacturonic Acid (C) MOPS -4.2 -4.1 compare
stress Phosphomycin 0.001 mg/ml +4.6 +5.5 compare