Fitness data for b2546 in Escherichia coli BW25113

yphD: predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI)
SEED: Predicted sugar ABC transport system, permease protein YphD
KEGG: simple sugar transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
plasmid transformation vcDART vector transformation; liquid outgrowth assay -0.8 -2.3 compare
stress octanol 0.08 vol% -0.7 -1.7 compare
lb LB, Anaerobic -0.6 -2.6 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.6 -1.5 compare
phage T7_phage 0.0015625 MOI TC1 -0.5 -1.7 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -0.5 -1.8 compare
stress LB Anaerobic with Furaltadone 0.000015625 mM -0.5 -2.6 compare
drt_type_3 DRT_type_3 +0.5 +2.1 compare
gfp_control GFP_control +0.5 +1.6 compare
drt_type_3 DRT_type_3 +0.5 +1.9 compare
fr_100_f2 Fr_100_F2 +0.5 +1.9 compare
motility inner cut, LB soft agar motility assay +0.5 +1.5 compare
retron_ec_48_control retron_Ec_48_control +0.5 +2.2 compare
stress acetate 70 mM +0.5 +2.7 compare
phage T7_phage_3.125_MOI +0.5 +2.8 compare
stress Aluminum chloride 5 mM +0.6 +2.1 compare
gfp_control GFP_control +0.6 +2.8 compare
phage Lambda_ci1857 +0.6 +2.8 compare
motility outer cut, LB soft agar motility assay +0.7 +1.7 compare
phage Papa dilution 10-1 cacl2 maltose +0.7 +3.9 compare