Fitness data for b2542 in Escherichia coli BW25113

hcaD: phenylpropionate dioxygenase, ferredoxin reductase subunit (NCBI)
SEED: 3-phenylpropionate dioxygenase ferredoxin--NAD(+) reductase component (EC 1.18.1.3)
KEGG: ferredoxin--NAD+ reductase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress LB Anaerobic with Nitrofurantoin 0.00003125 mM -1.2 -4.2 compare
stress Dimethyl Sulfoxide 10 vol% -0.7 -2.8 compare
stress Cobalt chloride 0.32 mM -0.7 -2.7 compare
stress Cephalothin 0.01 mg/ml -0.7 -2.0 compare
motility inner cut, LB soft agar motility assay -0.7 -1.9 compare
stress LB Anaerobic with Chloramphenicol 0.000001953125 mM -0.6 -2.6 compare
stress LB Anaerobic with Cephalothin 0.0000078125 mM -0.6 -1.9 compare
stress Chloramphenicol 0.0025 mg/ml -0.6 -2.2 compare
stress LB Anaerobic with Zinc Pyrithione 0.00000125 mM -0.6 -3.0 compare
phage Δdbn_10 -0.5 -1.5 compare
stress LB Anaerobic with Tetracycline 0.000000078125 mM -0.5 -2.6 compare
stress LB Anaerobic with Amoxicillin 0.00000390625 mM -0.5 -2.6 compare
stress LB Anaerobic with Chlorhexidine diacetate salt 0.000000625 mM -0.5 -1.8 compare
phage N4_phage 0.00009375 MOI TC4 -0.5 -1.6 compare
stress LB Anaerobic with Mecillinam 0.0000078125 mM -0.5 -2.7 compare
stress LB Anaerobic with Spiramycin 0.000125 mM +0.6 +2.7 compare
stress LB Aerobic with Phenazine ethosulfate 0.0000625 mM +0.6 +2.8 compare
control PBS_cage_1_mice _Feces_16 hr +0.6 +1.6 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay +0.7 +2.5 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay +1.1 +3.1 compare