Fitness data for b2491 in Escherichia coli BW25113

hyfR: putative 2-component regulator, interaction with sigma 54 (VIMSS)
KEGG: hydrogenase-4 transcriptional activator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage Ste41 -1.2 -4.0 compare
phage Ste41 -1.2 -4.6 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.5 -1.7 compare
lb LB -0.4 -2.7 compare
stress LB Aerobic with Nitrofurantoin 0.00003125 mM -0.4 -1.8 compare
carbon source carbon source D-Glucose 20mM -0.4 -2.0 compare
carbon source a-Ketoglutaric (C) +0.4 +2.2 compare
predation 6 hr rep1_HD100_10fold_dilution_grewON +0.4 +1.1 compare
phage Papa dilution 10-1 cacl2 maltose +0.4 +1.8 compare
stress LB Anaerobic with Chloramphenicol 0.00000390625 mM +0.4 +2.0 compare
motility inner cut, LB soft agar motility assay +0.4 +1.2 compare
stress Chlorite 1.25 mM +0.4 +1.4 compare
carbon source carbon source D-Mannose 0.5mM +0.4 +1.6 compare
stress LB Anaerobic with Ciprofloxacin Hydrochloride 0.00000001953125 mM +0.5 +2.4 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.5 +2.5 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB +0.5 +1.9 compare
phage Phage_N4_cage_3_mouse_4_Cecum_40 hr +0.6 +1.8 compare
balo Mixed culture, Halobacteriovorax-1 +0.6 +2.5 compare
motility outer cut, LB soft agar motility assay +0.6 +1.4 compare
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM +0.6 +2.9 compare