Fitness data for b2200 in Escherichia coli BW25113

ccmB: heme exporter subunit (NCBI)
SEED: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
KEGG: heme exporter protein B

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
mixed community control mixed community control -1.1 -2.0 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay -1.0 -2.6 compare
stress Benzalkonium Chloride 0.004 mg/ml -0.9 -1.6 compare
attachment_assay_attached_sample Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -0.9 -1.9 compare
stress LB Anaerobic with Cephalothin 0.0000078125 mM -0.9 -2.2 compare
phage HSDP4 -0.8 -1.0 compare
no phage control NophageCTRB12 -0.8 -2.2 compare
phage PoolT9D30 -0.7 -1.6 compare
no phage control NophageCTRC12 -0.7 -2.1 compare
stress Cisplatin 0.1 mg/ml -0.7 -1.4 compare
control PBS_cage_2_mouse_1_Cecum_40 hr -0.6 -1.2 compare
carbon source carbon source D-Mannose 5mM +0.6 +1.1 compare
predation 6 hr rep1_HD100_10fold_dilution_grewON +0.6 +1.2 compare
stress octanol 0.08 vol% +0.7 +1.6 compare
phage Goslar +0.7 +2.3 compare
carbon source carbon source D-Glucose 0.25mM +0.8 +1.6 compare
phage Phage_N4_cage_3_mouse_4_Cecum_40 hr +0.9 +2.0 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 +1.1 +1.7 compare
control PBS_cage_1_mouse_1_Cecum_40 hr +1.1 +2.4 compare
phage RB51m1 +1.2 +2.0 compare