Fitness data for b2197 in Escherichia coli BW25113

ccmE: periplasmic heme chaperone (NCBI)
SEED: Cytochrome c-type biogenesis protein CcmE, heme chaperone
KEGG: cytochrome c-type biogenesis protein CcmE

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
attachment_assay_attached_sample Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -1.0 -2.8 compare
carbon source carbon source D-Glucose 0.25mM -1.0 -2.1 compare
phage R2_N4_T1_phage10 -1.0 -2.0 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay -0.9 -2.1 compare
predation 6 hr rep2_HD100_10fold_dilution_grewON -0.8 -2.1 compare
carbon source carbon source D-Glucose 1mM -0.8 -2.4 compare
phage T7_phage 0.00015625 MOI TC3 -0.8 -1.6 compare
phage PoolT9D23 -0.7 -2.1 compare
carbon source carbon source D-Mannose 0.5mM -0.7 -1.0 compare
phage T7_phage 0.00015625 MOI TC4 -0.7 -2.0 compare
stress LB Anaerobic with Furaltadone 0.000015625 mM -0.7 -2.4 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -0.7 -1.6 compare
lb LB, Aerobic +0.7 +2.8 compare
phage Phage_N4_cage_3_mouse_4_Cecum_40 hr +0.7 +1.3 compare
predation 48 hr rep3_Tiberius_no_dilution +0.7 +3.6 compare
phage RB51m1 +0.8 +1.4 compare
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM +0.8 +2.2 compare
stress LB Anaerobic with Nitrofurantoin 0.00003125 mM +1.0 +2.0 compare
stress LB Aerobic with 2-Mercaptopyridine N-oxide 0.0000078125 mM +1.1 +1.8 compare
mixed community control mixed community control +1.1 +1.2 compare