Fitness data for b2194 in Escherichia coli BW25113

ccmH: heme lyase, CcmH subunit (NCBI)
SEED: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH
KEGG: cytochrome c-type biogenesis protein CcmH

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage RB51m1 -0.6 -1.7 compare
phage Ste41 -0.5 -1.4 compare
no phage control CTR -0.5 -2.4 compare
stress LB Anaerobic with Novobiocin 0.000125 mM -0.5 -3.0 compare
stress LB Aerobic with Irgasan 0.0000003125 mM -0.5 -2.5 compare
predation 6 hr rep2_HD100_10fold_dilution_grewON -0.4 -1.5 compare
phage NpK -0.4 -2.4 compare
stress Tetracycline 0.0008 mg/ml -0.4 -2.0 compare
carbon source Dodecane and Rhamnolipid (C) -0.4 -2.1 compare
no phage control NophageCTRB12 -0.4 -1.8 compare
mixed community control; abiotic network mixed community control; abiotic network -0.4 -1.3 compare
stress LB Anaerobic with Nitrofurantoin 0.000015625 mM -0.4 -1.9 compare
attachment_assay_attached_sample Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -0.4 -1.6 compare
control 6 hr rep1_No_BD100_grewON -0.4 -2.3 compare
no phage control NophageCTRA12 -0.4 -1.8 compare
predation 6 hr rep1_HD100_10fold_dilution_grewON -0.4 -1.2 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay -0.4 -1.8 compare
stress LB Anaerobic with Chlorhexidine diacetate salt 0.000000625 mM +0.4 +2.0 compare
stress Ciprofloxacin Hydrochloride 0.0003 mM +0.4 +1.4 compare
stress Ciprofloxacin Hydrochloride 0.0003 mM +0.4 +2.1 compare