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  • Fitness data for b2109 in Escherichia coli BW25113

    yehB: predicted outer membrane protein (NCBI)
    SEED: Fimbriae usher protein StcC

    Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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    group condition fitness t score  
    M9 Acetate 0.5% aerobic -0.9 -7.2 compare
    M9 Glucose 2%, 20 mM NO3- anaerobic -0.8 -6.5 compare
    M9 Glucose 2% anaerobic -0.8 -6.4 compare
    carbon source carbon source D-Glucose 0.25mM -0.7 -4.1 compare
    M9 Glucose 2% aerobic -0.7 -5.8 compare
    carbon source carbon source D-Glucose 0.25mM -0.7 -3.8 compare
    M9 Acetate 0.5% aerobic -0.7 -5.6 compare
    M9 Glucose 2% aerobic -0.7 -5.4 compare
    M9 Glucose 2% anaerobic -0.6 -4.9 compare
    mixed community Mixed culture; Bdellovibrio bacteriovorus HD100 1:10 starting OD to Ecoli; 0.1X M9; outgrowth in LBwithKan -0.5 -4.5 compare
    stress LB Aerobic with Benzethonium chloride 0.000015625 mM -0.5 -3.5 compare
    predation 6 hr rep2_HD100_10fold_dilution_grewON -0.5 -2.8 compare
    stress LB Aerobic with Benzethonium chloride 0.000015625 mM -0.4 -3.3 compare
    control PBS_cage_1_mouse_1_Cecum_40 hr -0.4 -2.4 compare
    stress LB Anaerobic with Irgasan 0.000000625 mM -0.4 -3.3 compare
    stress LB Anaerobic with Benzethonium chloride 0.000015625 mM -0.4 -3.2 compare
    carbon source carbon source D-Mannose 5mM -0.4 -2.6 compare
    stress Trimethoprim 0.005 mM +0.4 +2.9 compare
    phage Papa dilution 10-1 cacl2 maltose +0.5 +4.0 compare
    stress Chlorite 1.25 mM +0.7 +5.5 compare