Fitness data for b2010 in Escherichia coli BW25113

dacD: penicillin binding protein 6b (VIMSS)
SEED: D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)
KEGG: D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress LB Anaerobic with Cefoxitin 0.000003125 mM -0.8 -3.0 compare
phage N4_phage 0.0009375 MOI TC2 -0.8 -3.0 compare
carbon source carbon source D-Mannose 1mM -0.7 -1.3 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -0.7 -1.6 compare
stress LB Aerobic with Irgasan 0.0000003125 mM -0.6 -2.2 compare
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM -0.6 -1.5 compare
control PBS_cage_2_mouse_1_Cecum_40 hr -0.6 -1.3 compare
msc 3hr_mediaonly_rep1_lowinoculum -0.6 -3.0 compare
stress Cisplatin 0.1 mg/ml -0.6 -1.6 compare
control PBS_cage_1_mouse_1_Cecum_40 hr -0.5 -0.9 compare
phage Phage_N4_cage_3_mouse_3_Cecum_40 hr +0.5 +1.6 compare
toxin CA_0.05 +0.5 +2.5 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay +0.6 +1.3 compare
bacterial adhesion 1/10ON stiff +0.6 +2.6 compare
nophagecontrol R1_N4_T1_phage0 +0.6 +2.3 compare
phage PoolT9D26 +0.6 +1.1 compare
stress LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM +0.6 +2.1 compare
stress LB Anaerobic with Ampicillin 0.00000195313 mM +0.7 +2.4 compare
phage PoolT9D30 +0.7 +1.8 compare
phage T7_phage 0.0015625 MOI TC2 +1.2 +2.4 compare