Fitness data for b1962 in Escherichia coli BW25113

yedJ: predicted phosphohydrolase (NCBI)
SEED: metal-dependent phosphohydrolase
KEGG: uncharacterized protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
plasmid transformation vcDART vector transformation; liquid outgrowth assay -1.3 -3.1 compare
phage T7_phage 0.00015625 MOI TC3 -1.2 -2.3 compare
attachment_assay_attached_sample Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -0.9 -2.5 compare
stress 3-methyl-1-butanol 2.5 vol% -0.8 -2.2 compare
phage T7_phage 0.00015625 MOI TC4 -0.7 -1.4 compare
stress Cisplatin 0.1 mg/ml -0.7 -1.1 compare
stress Ciprofloxacin Hydrochloride 0.0003 mM -0.7 -0.9 compare
stress LB Anaerobic with Nitrofurantoin 0.00003125 mM -0.6 -1.3 compare
stress LB Aerobic with Doxycycline hyclate 0.0000015625 mM +0.6 +2.2 compare
stress LB Anaerobic with Nitrofurantoin 0.000015625 mM +0.6 +2.2 compare
predation 48 hr rep1_Tiberius_no_dilution +0.6 +3.2 compare
stress LB Anaerobic with Sulfamonomethoxine 0.00003125 mM +0.6 +2.7 compare
stress LB Anaerobic with 2-Mercaptopyridine N-oxide 0.000015625 mM +0.7 +2.7 compare
phage Phage_N4_cage_3_mouse_3_Cecum_40 hr +0.7 +2.4 compare
predation 48 hr rep3_Tiberius_100fold_dilution +0.7 +3.0 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 +0.8 +2.0 compare
motility inner cut, LB soft agar motility assay +0.8 +3.9 compare
stress LB Anaerobic with Ampicillin 0.00000195313 mM +0.8 +2.1 compare
stress LB Anaerobic with Sulfamonomethoxine 0.0000625 mM +0.8 +3.0 compare
control PBS_cage_1_mice _Feces_16 hr +1.0 +2.2 compare