Fitness data for b1960 in Escherichia coli BW25113

vsr: DNA mismatch endonuclease of very short patch repair (NCBI)
SEED: Very-short-patch mismatch repair endonuclease (G-T specific)
KEGG: DNA mismatch endonuclease, patch repair protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
stress octanol 0.08 vol% -2.4 -2.7 compare
phage Phage_N4_cage_3_mouse_3_Cecum_40 hr -1.5 -1.5 compare
carbon source Dodecanol (C) -1.5 -2.9 compare
control PBS_cage_2_mouse_3_Cecum_40 hr -1.2 -2.5 compare
stress LB Aerobic with Tetracycline 0.00000125 mM -1.2 -2.7 compare
phage T7_phage 0.00015625 MOI TC4 -1.2 -2.1 compare
phage Ste41 -1.2 -1.4 compare
vitamin M9 with Pyridoxine HCl 100 nM and 4-Deoxypyridoxine 0.25 uM -1.2 -3.1 compare
phage T7_phage 0.0015625 MOI TC1 -1.1 -1.8 compare
phage RB68 -1.0 -2.0 compare
stress LB Aerobic with Oxytetracycline 0.0000003125 mM -1.0 -2.8 compare
control PBS_cage_1_mouse_1_Cecum_40 hr -0.9 -1.0 compare
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM -0.9 -1.4 compare
protonated/deuterated deuterated glucose in H2O +1.0 +4.2 compare
stress Bacitracin 1 mg/ml +1.0 +2.4 compare
stress toluene 2.5 vol% +1.0 +2.4 compare
stress limonene 5 vol% +1.0 +3.7 compare
carbon source carbon source D-Glucose 5mM +1.1 +1.7 compare
carbon source Ying_Others16 rep A; time point 2 +1.1 +2.4 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB +1.1 +1.8 compare