Fitness data for b1761 in Escherichia coli BW25113

gdhA: glutamate dehydrogenase (NCBI)
SEED: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
KEGG: glutamate dehydrogenase (NADP+)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source succinate (C) -0.8 -3.9 compare
stress LB Anaerobic with Zinc Pyrithione 0.00000125 mM -0.7 -3.5 compare
carbon source L-Malic (C) -0.7 -3.6 compare
M9 Acetate 0.5% aerobic -0.7 -3.8 compare
M9 Acetate 0.5% aerobic -0.7 -3.7 compare
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM -0.6 -1.7 compare
carbon source a-Ketoglutaric (C) -0.6 -2.5 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -0.6 -1.7 compare
stress LB Aerobic with Trimethoprim 0.00000125 mM -0.5 -2.4 compare
stress LB Anaerobic with Cephalothin 0.0000078125 mM -0.5 -2.3 compare
stress LB Aerobic with Doxycycline hyclate 0.0000015625 mM -0.5 -2.2 compare
control PBS_cage_2_mouse_2_Cecum_40 hr +0.5 +1.6 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.6 +3.2 compare
no stress control M9 no stress control; Aerobic 48 hr +0.6 +4.7 compare
carbon source D-Serine (C) +0.6 +3.6 compare
no stress control M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr +0.6 +3.5 compare
stress Ciprofloxacin Hydrochloride 0.0003 mM +0.7 +1.9 compare
carbon source D-Serine (C) +0.7 +5.0 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.7 +5.4 compare
carbon source carbon source D-Glucose 5mM +0.8 +2.1 compare