Fitness data for b1560 in Escherichia coli BW25113

ydfU: Qin prophage; predicted protein (RefSeq)
SEED: Phage antitermination protein Q

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
stress Trimethoprim 0.005 mM -1.9 -2.2 compare
attachment_assay_attached_sample Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -1.3 -1.8 compare
carbon source carbon source D-Mannose 1mM -1.0 -1.7 compare
carbon source Guanosine 0.35306 mM (C) -0.9 -2.7 compare
stress Ciprofloxacin Hydrochloride 0.0003 mM -0.9 -1.9 compare
control PBS_cage_2_mouse_2_Cecum_40 hr -0.9 -1.6 compare
stress Butyrolactam 3 vol% -0.9 -4.0 compare
motility inner cut, LB soft agar motility assay -0.8 -1.9 compare
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM -0.8 -2.2 compare
control PBS_cage_1_mouse_1_Cecum_40 hr -0.8 -1.0 compare
nophagecontrol R1_N4_T1_phage0 +0.8 +1.8 compare
stress LB Anaerobic with Trimethoprim 0.0000003125 mM +0.8 +3.5 compare
stress LB Anaerobic with Amoxicillin 0.00000390625 mM +0.8 +3.1 compare
motility inner cut, LB soft agar motility assay +0.8 +1.6 compare
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM +0.8 +1.4 compare
phage T7_phage 0.00015625 MOI TC3 +0.8 +1.3 compare
phage T7_phage 0.0015625 MOI TC2 +0.8 +1.6 compare
phage R1_N4_T2_phage8 +0.8 +2.1 compare
stress LB Anaerobic with Nitrofurantoin 0.00003125 mM +1.1 +2.0 compare
motility outer cut, LB soft agar motility assay +1.2 +1.5 compare