Fitness data for b1542 in Escherichia coli BW25113

ydfI: predicted mannonate dehydrogenase (NCBI)
SEED: D-mannonate oxidoreductase (EC 1.1.1.57)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
carbon source carbon source D-Mannose 1mM -2.0 -2.3 compare
predation 6 hr rep1_HD100_10fold_dilution_grewON -1.6 -1.8 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -1.5 -3.0 compare
carbon source carbon source D-Glucose 0.5mM -1.4 -2.8 compare
motility outer cut, LB soft agar motility assay +1.3 +1.7 compare
carbon source Ying_Nucleobase14 rep B; time point 3 +1.3 +2.8 compare
msc 22hr_MSC_rep2_highinoculum +1.3 +2.1 compare
stress Chlorite 1.25 mM +1.4 +2.3 compare
msc 22hr_mediaonly_rep1_lowinoculum +1.4 +2.0 compare
carbon source Ying_Others16 rep B; time point 2 +1.4 +2.9 compare
msc 22hr_MSC_rep1_lowinoculum +1.5 +2.5 compare
carbon source Guanosine 0.35306 mM (C) +1.5 +3.3 compare
carbon source LMW_DNA_from_Pseudomonas_EB271-B4-1 12 ppm (C) +1.5 +2.2 compare
carbon source LMW_DNA_from_Pseudomonas_EB271-B4-1 12 ppm (C) +1.5 +2.3 compare
stress LB Aerobic with Zinc Pyrithione 0.0000025 mM +1.6 +2.1 compare
msc 22hr_MSC_rep2_lowinoculum +1.6 +2.2 compare
carbon source Ying_Others16 rep A; time point 2 +1.6 +3.3 compare
control PBS_cage_1_mice _Feces_16 hr +1.6 +2.2 compare
carbon source LMW_DNA_from_Lysinibacillus_FW301-JW8 7.7 ppm (C) +1.8 +3.3 compare
stress Trimethoprim 0.005 mM +2.4 +2.4 compare